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Analysis Biomolecular Interactions of PP1α (7-300) with Phactr1 (517-580) by BLI (CAT#: STEM-MB-0208-CJ)

Introduction

PPP family phosphatases are metalloenzymes that carry out the majority of protein serine/threonine dephosphorylation. The three Protein Phosphatase 1 (PP1) isoforms regulate diverse cellular processes, acting in partnership with over 200 different PP1-interacting proteins (PIPs). Some PIPs are PP1 substrates, but others are PP1 cofactors, which variously determine substrate specificity, subcellular targeting and/or coupling to regulatory pathways. PIPs can interact both with these grooves and with other PP1 surface features.

The four Phosphatase and actin regulator (Phactr) proteins are novel PIPs that are implicated in cytoskeletal regulation in animal models and cell culture settings. The Phactrs bind G-actin via multiple RPEL motifs present in their conserved N- and C-terminal regions. Phactr1 and Phactr3 inhibit dephosphorylation of phosphorylase a by PP1 in vitro, but Phactr4/PP1 complex formation is associated with cofilin dephosphorylation in vivo.




Principle

Bio-Layer Interferometry (BLI) is an optical technique for measuring macromolecular interactions by analyzing interference patterns of white light reflected from the surface of a biosensor tip. BLI experiments are used to determine the kinetics and affinity of molecular interactions. In a BLI experiment, one molecule is immobilized to a Dip and Read Biosensor and binding to a second molecule is measured. A change in the number of molecules bound to the end of the biosensor tip causes a shift in the interference pattern that is measured in real-time.

Applications

Biochemistry

Procedure

1. Detect Buffers and prepare samples. BLI experiments are set up with one molecule immobilised on the surface of the biosensor (load sample) and a second molecule in solution (the analytical sample).
2. Fix the load sample on the biocompatible biosensor while the analytical sample is in solution.
3. The biosensor tip is immersed in the solution so that the target molecule begins to bind to the analysis sample.
4. Set up and run the BLI experiment. Molecules bound to or dissociated from the biosensor can generate response curves on the BLI system; unbound molecules, changes in the refractive index of the surrounding medium or changes in flow rate do not affect the interferogram pattern.
5. Collect and analyse data on the BLI's system.

Materials

• Equipment: Fortebio Bio-Layer Interferometry (BLI)
• Sample Type: DNA, RNA, Protein, Antibodies, Peptides, Small Molecules
• Optionals: E. coli cells, pET28 PP1(7–330), pcDNA3.1 IRSp53
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