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In this service, we provide developed an agarose-based native gel electrophoresis method that works for both acidic and basic proteins using histidine-MES buffer. This electrophoresis can be done in a flat-bed mode or a vertical mode. While in the flat-bed mode both acidic and basic proteins can be simultaneously analyzed, the vertical gel can only be used for either protein. With this method, proteins, BSA, lysozyme, chymotrypsin and bovine gamma globulin can be analyzed.