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Study of the structure and transformation of amorphous calcium carbonate from plant cystoliths by X-ray absorption spectroscopy (XAS) (CAT#: STEM-ST-0272-WXH)

Introduction

Cystoliths are intracellular calcified bodies which are found in great numbers in the leaves of many higher plants such as Ficus retusa. The mineral part of these deposits is amorphous calcium carbonate, which transforms to calcite only when moistened. The production and maintenance of the amorphous phase is clearly under biological control. The cystoliths may act as a pH-stat which neutralizes hydroxide ions. Potentially cytotoxic cations also accumulate in the cystoliths. Rapid precipitation of calcium carbonate into the organic matrix could favour the amorphous phase, which may be maintained by low concentrations of magnesium and phosphate, which are inhibitors of the nucleation of crystalline phases.




Principle

X-ray spectroscopy works on the principle of the excitation of core electrons that are orbiting in the lower shell(s). As the electron absorbs x-rays, it becomes excited and jumps to a higher level. The X-ray region used ranges from 1 to 100 nm. When x-rays interact with electrons it excites electrons to the higher levels. Energy absorbed by the electrons has a characteristic value for each element one can distinguish with the X-ray absorption spectrum.
X-ray absorption spectroscopy (XAS) is the measurement of transitions from core electronic states of the metal to the excited electronic states (LUMO) and the continuum; the former is known as X-ray absorption near-edge structure (XANES), and the latter as extended X-ray absorption fine structure (EXAFS) which studies the fine structure in the absorption at energies greater than the threshold for electron release. These two methods give complementary structural information, the XANES spectra reporting electronic structure and symmetry of the metal site, and the EXAFS reporting numbers, types, and distances to ligands and neighboring atoms from the absorbing element

Applications

X-ray absorption spectroscopy (XAS) is a widely used technique for determining the local geometric and/or electronic structure of matter.

Materials

• X-ray generating equipment (X-ray tube)
• Collimators
• Monochromators
• X-ray detectors
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