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Analysis Biomolecular Interactions of Nanobodies17 (Nb17) and Nanobodies (Nb82) to CTNa V 1.4 and CTNa V 1.5 by BLI (CAT#: STEM-MB-0167-CJ)

Introduction

Nanobodies (Nbs) are single variable heavy-chain immunoglobulin domains derived from heavy-chain–only Abs produced in camelids, such as camels, llamas (Lama glama), and alpacas. Nbs are small prolate-shaped molecules (∼15 kDa) that fully retain the epitope-recognizing function in a single-chain Ab. They may be selected to contain an extended and flexible complementarity-determining region 3 (CDR3) loop partly contributing to their high epitope affinity and their ability to better access smaller and cryptic epitopes. Moreover, variable heavy-chain domains are amenable to cloning and protein modifications and can be produced in bacterial expression systems in scalable amounts. Nbs also display superior solubility, stability, in vivo half-lives, and pharmacodynamics compared with conventional Abs. For example, Nbs to P2x channel proteins have been shown to display greater therapeutic potential than conventional Abs for modulating channel function and reducing the in vivo inflammation caused by P2X7. Nbs have also been used as crystallization chaperones, visualization agents, in vivo radiotracers, pulldown baits, intracellular pathway modulators, virus neutralization agents, and therapeutics agents.




Principle

Bio-Layer Interferometry (BLI) is an optical technique for measuring macromolecular interactions by analyzing interference patterns of white light reflected from the surface of a biosensor tip. BLI experiments are used to determine the kinetics and affinity of molecular interactions. In a BLI experiment, one molecule is immobilized to a Dip and Read Biosensor and binding to a second molecule is measured. A change in the number of molecules bound to the end of the biosensor tip causes a shift in the interference pattern that is measured in real-time.

Applications

Immunology/Inflammation; Pharmacology

Procedure

1. Detect Buffers and prepare samples. BLI experiments are set up with one molecule immobilised on the surface of the biosensor (load sample) and a second molecule in solution (the analytical sample).
2. Fix the load sample on the biocompatible biosensor while the analytical sample is in solution.
3. The biosensor tip is immersed in the solution so that the target molecule begins to bind to the analysis sample.
4. Set up and run the BLI experiment. Molecules bound to or dissociated from the biosensor can generate response curves on the BLI system; unbound molecules, changes in the refractive index of the surrounding medium or changes in flow rate do not affect the interferogram pattern.
5. Collect and analyse data on the BLI's system.

Materials

• Equipment: Fortebio Bio-Layer Interferometry (BLI)
• Sample Type: DNA, RNA, Protein, Antibodies, Peptides, Small Molecules
• Optionals: MaxiSorp Plates