Apis mellifera can produce honey from the nectar of flowers (floral honey), secretions of living parts of plants or excretions of plant-sucking insects on the living parts (honeydew honey). Aliphatic organic acids (AOA) make a strong contribution to flavor, taste, acidity, pH and electrical conductivity.This service provides a new and fast capillary electrophoresis method to determine 14 AOA simultaneously in bracatinga (Mimosa scabrella Bentham) honeydew honey and floral honey. Separation of fourteen compounds occurred in 9 min using glyoxylic acid as an internal standard, and the background electrolyte was comprised of phthalic acid (20 mmol L−1,) Tris (14 mmol L−1), CTAB(1.6 mmol L−1), CaCl2 (1 mmol L−1), pH 3.3.