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Study of Changes in Intra-Nuclear Mechanics in Response To DNA Damaging Agents by Brillouin Scattering (CAT#: STEM-ST-0153-YJL)

Introduction

Gene integrity is continuously challenged by DNA lesions caused by normal metabolic activities or environmental factors. In the event of a DNA break, the cell activates DNA damage response pathways that allow detection and repair of the lesion. Failures to repair are important sources of genome instability, giving rise to chromosomal aberrations and severe biological consequences including tumorigenesis and cell death. Although studies have been conducted to explore changes in the physical organization of the nucleus in response to DNA damage, the description remains incomplete mainly due to the limitation of the existing technologies. However, research has shown that both DNA damage and repair lead to the activation of different biochemical pathways and to major nuclear reorganization, for which alteration of the nucleus mechanics has been increasingly recognized as the hallmark event. Direct measurement of the mechanical behavior of the interior of the nucleus is thus expected to give a better understanding of the structural changes that accompany the cell response to DNA damage.




Principle

From a quantum point of view, Brillouin scattering is an interaction of light photons with acoustic or vibrational quanta (phonons), with magnetic spin waves (magnons), or with other low frequency quasiparticles interacting with light. The interaction consists of an inelastic scattering process in which a phonon or magnon is either created (Stokes process) or annihilated (anti-Stokes process). The energy of the scattered light is slightly changed, that is decreased for a Stokes process and increased for an anti-Stokes process. This shift, known as the Brillouin shift, is equal to the energy of the interacting phonon and magnon and thus Brillouin scattering can be used to measure phonon and magnon energies.

Applications

Brillouin scattering is used to determine acoustic velocities and elastic properties of a number of crystalline solids, glasses, and liquids.

Procedure

1. Sample preparation
2. Measurement by scattering detection instrument
3. Data analysis

Materials

Brillouin scattering measurement system (Brillouin spectrometer)
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