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Transcriptome analyses enhance our understanding of RNAbased regulatory mechanisms in prokaryotic organisms as well within the nuclearcytosolic compartments of eukaryotic cells. Higher plant organelles employ complex posttranscriptional regulatory mechanisms, which are studied in a comprehensive fashion by different RNAmethodologies. Northern blot hybridization provides with important data to the "steadystate" level of accumulation of a given transcript in the sample, and thus remains as a standard method for detection and quantitation of RNA levels, despite the advent of other powerful techniques.