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Study of Long-term molecular turnover of actin stress fibers by Fluorescence recovery after photobleaching (FRAP) (CAT#: STEM-MT-0031-WXH)

Introduction

Subcellular multiprotein structures that shape cells are continuously replaced with surrounding proteins in cells, a phenomenon called turnover. Short-term turnover, which is often analyzed in cell biology studies, is driven mainly by the Brownian motion-based diffusion and chemical replacement. The diffusion-dominant turnover is typically completed within a few seconds because of the fast diffusive nature. Meanwhile, the chemical replacement occurs over a wider range of time scales that can take several minutes. The latter case, involving chemical reactions, is potentially subjected to an additional mechanical factor, advection, namely the transport of the proteins by local bulk motion. The involvement of advection becomes evident particularly when proteins of interest closely bind to actin cytoskeletal structures as they can be translocated due to the myosin-driven and/or actin polymerization-induced retrograde flow. Thus, the interpretation of the long-term turnover can be more complicated than the short-term one because of the involvement of intracellular advection.




Principle

Fluorescence recovery after photobleaching (FRAP) is a microscopy technique capable of quantifying the mobility of molecules within cells. By exploiting the phenomenon of photobleaching, fluorescent mole- cules within a region of interest can be selectively and irreversibly 'turned off'. It is capable of quantifying the two-dimensional lateral diffusion of a molecularly thin film containing fluorescently labeled probes, or to examine single cells.

Applications

• Characterization of the mobility of individual lipid molecules within a cell membrane.
• Analysis of molecule diffusion within the cell
• Study of protein interaction partners, organelle continuity and protein trafficking.

Procedure

1. An initial fluorescence of fluorescent molecules is measured in the region of interest (ROI).
2. The fluorescent molecules are rapidly photobleached by focusing the high-intensity laser beam onto the defined area.
3. The exchange of bleached molecules with unbleached molecules from the surrounding region is followed over time using a low-intensity laser.

Materials

• Optical microscope.
• Light source.
• Fluorescent probe.
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