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Chromatin immunoprecipitation sequecing (ChIP-seq), is a method used to analyze protein interactions with DNA. ChIP-seq combines chromatin immunoprecipitation (ChIP) with massively parallel DNA sequencing to identify the binding sites of DNA-associated proteins. It can be used to map global binding sites precisely for any protein of interest.
The main advantages of ChIP-seq are the excellent base pair resolution and the reduced number of samples required.